Yeah I had everything on.
No trip 2 lines,
longer replays 3 lines,
auto l cancel 32 lines,
hitstun 33 lines,
lagless edges 54 lines,
no asl 45 lines,
dash cancel 27 lines,
p trainer infinite stam 28 lines,
p trainer no swap on death 11 lines,
strong hit shield stun 11 lines,
weak hit shield stun 1 line,
hold l for level freeze 6 lines,
fall speed 1 line,
decay modifier 6 lines,
frame buffer 23 lines,
giza's grab escape fix 6 lines.
Right before I started brawl I updated HBC to it's newest version.
I tried again with less codes to get under the 256 limit and my gamecube controller worked again. When I went over the only thing that happened was that the gcn controlled didn't do anything.