D
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Did it rip her DNA? Pretty sure it just took over her Phazon suit and modified it.That doesn't make DS trans necessarily. I don't like getting into these types of arguments, but I'm mega dumb so I'll dip in.
Metroid Prime ripped in Samus' DNA and became Dark Samus. We don't know if the Metroids have sexes/genders/whatever, but whatever came out of it she copied.
Also, we don't know how the Metroid reproduce exactly, but they're inspired by the Xenomorphs of Alien, which are parasitic, meaning I think that'd also make them asexual as well.